Topic 1.3: Structure and bonding

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1.3(a) Understand the nature of ionic, covalent and dative covalent bonds and the simple charge cloud representation of s and p bonds.

Ionic bonds
Ionic (or electrovalent) Bonding is formed by the transfer of electrons. For example the sodium atom has one electron on its outer shell, the chlorine atom has seven electrons on its outer shell. During ionic bonding the sodium ion transfers its outer electron to the chlorine atom, and becomes a Na+ ion with the stable configuration of an inert gas. At this time the chlorine atom gains the transferred electron and so forms a Cl- ion also with an inert gas configuration. This results in  electrostatic attraction between the new ions of the compound, and so ionic bonds are formed.

Covalent bonds.
Task 1.3a.2 Draw dot and cross diagrams to show the bonding in HF, F2, NH3, CH4, H2O, F2O,  CHCl3, O2,CO2, C2H4, C2H2.

Dative covalent bonds.

      This hydrated magnesium ion has 6 coordinate (dative covalent) bonds formed by the lone pairs on each of the 6 surrounding water molecules.
            H

             |
      H--N->H
             |
            H
 Task 1.3a.3 Draw dot and cross diagrams to show the bonding in NH4Cl and NH3AlCl3.

Charge Cloud Representation
Bonding orbitals are molecular orbitals formed by the bonding of two or more atoms.  Common bonds are between s, p, sp3 hybrid or sp2 hybrid orbitals.
There are two types:- 1) Sigma  s and 2) Pi  p

1) A Sigma bond or a Sigma molecular orbital is formed by the single overlap of 2 s-orbitals, 2 p-orbitals or s and p orbitals overlapping, these are shown in the diagrams below.
=(Sigma) s  bond.


 
 

= (Pi) p bond.


Task 3.1a.4 Draw lines to show bonds and identify the sigma and pi bonds in the following: CHCl3, O2,CO2, C2H4, C2H2.

1.3(b)Understand the intermediate nature of most bonds in terms of (i)Electronegativity differences leading to polarity in bonds. 
(ii)Polarising power of cations and polarisibilty of anions and the factors affecting these.

(i) Electronegativity
Electronegativity of an element is the power of one of its atoms in a molecule to attract electrons to itself. Electronegativity increases as you go across a period from left to right and also as you go up a group from bottom to top, making fluorine an extremely electronegative element.
Bond Polarity
 If a pair of electrons in a covalent bond are unequally shared, bond polarisation has taken place. e.g. Hydrogen chloride has a polar bond d+ H-ClD-
Task 3.1bi.1 Identify the most electronegative elements in these sets: carbon or nitrogen, oxygen or fluorine, chlorine or fluorine, bromine or iodine
Task 3.1bi.2 Identify the bonds which will be polar in the following molecules: H2, HCl, CH4, CH3Cl, HF, F2, H2O, H2S.

(ii) The Polarisation of ions
Not all ionic bonds are completely ionic.  The cation (+ve) may pull electrons from the anion (-ve).
Factors affecting polarisation of ions

Task 1.3bii.1 Select the most easily polarised anion and give a reason for the following pairs: bromide and chloride, chloride and iodide, bromide and iodide.
Task 1.3ii.2  Select the cation with the best polarising power and give a reason for: sodium and magnesium, aluminium and lithium, lithium and sodium, potassium and sodium.

1.3 (c)Understand that polar bonds may give rise to polar molecules.

The covalent bond in HCl is polar. This bond has a dipole moment shown by the sign:

In this case the whole molecule has a dipole moment so HCl is a polar molecule; a dipole.  Water is also a polar molecule.  The dipole moments for each O-H bond add to give water an overall dipole moment in one direction.
Carbon dioxide has e
qual and opposite dipole moments which cancel out, therefore CO2 is not a polar molecule.  Tetrachloromethane, CCl4, is also not a polar molecule as it is symmetrical.  Symmetrical molecules tend not to be polar, a symmetrical tend to be polar.
Sort the following as polar or non-polar molecules: Cl2, HBr, CHCl3, BF3, BeCl2, H2S, H2O, NH3, SF6.

1.3 (d) Understand the nature of intermolecular forces, resulting from interactions between permanent dipoles and induced dipoles and from the formation of hydrogen bonds.

Van der Waal’s Forces
These are weak attractive forces between atoms and molecules. Responsible for non-ideal behaviour of gases and for the lattice energy of molecular crystals. They are caused by;   b and c are temporary dipoles.  These forces exist for any molecule and are greater if there is a greater number of electrons present

Hydrogen bond
This is a very strong dipole-dipole force as hydrogen has a very high charge density (whenever hydrogen is joined to an electronegative element (E.g. F, N, and O)). (It is a bare proton). E.g hydrogen bonds are found in H-F.

Task 1.3d Name the bonding between the following molecule pairs. CH4 and C2H6, H2O and H2O, CO and CH4, CO2 and NH3, HF and H2O, CO and Cl2O.
 
(e)
Show how these various types of bond give rise to giant atomic structures (eg diamond and graphite), hydrogen bonded molecular structures (eg ice), ionic structures (eg sodium chloride), simple molecular structures (e.g. iodine) and polymers (eg poly(ethene)) and how the properties of solids are related to their structure and bonding.

Simple molecular structures.
substance density/gcm-3 melting point/K electrical conductivity
O2 1.15 at 90K 55 very low
H2 0.07 at 20K 14 very low
S2 2.0 390 very low
CH4 0.46 91 very low
I2 4.93 387 very low

Task 1.3e.1

Ionic structures.
Caesium chloride

Sodium Chloride 6:6 co-ordination:  each chloride ion has 6 sodium ions as it’s nearest neighbours. Each sodium ion is also surrounded by six chloride ions as it’s nearest neighbours. The electrostatic forces holding the ions in place are not directional. mp = 1081K, density = 2.17gcm-3
All ionic compounds:

Giant atomic structures.

Task 1.3e.2 

The structure of graphite.
Graphite is soft as there are weak bonds between layers, thus allowing layers to slide over each other. (Large distances between layers imply weak bonds.)
Graphite has a high melting point and boiling point as 3 strong covalent bonds hold each atom in place.
Graphite conducts heat and electricity in one direction due to delocalised electrons between the layers.
Low density (2.25
gcm-3) because the layers are far apart.

Hydrogen bonded molecular structures
H2O, NH3,  Hydrogen bonds between molecules are stronger than other intermolecular forces.  So water has a higher melting temperature than expected and is a liquid and not a gas.  These are all electrical insulators as there are no charged particles to carry current.

The Structure of ice.


Ice has a molecular structure but unusual properties, e.g. it solid has a lower density than its liquid. Water is at its maximum density at 4oC. Four hydrogen bonds, two through its hydrogen atoms and two through its oxygen atoms hold each water molecule in place. On melting, many hydrogen bonds are broken and the structure collapses to give a lower volume liquid.  Water expands on freezing so ice floats as it has a lower density than water.
 

The structure of polymers.
Low electrical conductivity as there are no charged particles to carry current.

High density.  High relative melting point.  Chains (molecules) close together.  Van der Waal’s forces along full length of chain pulls chains together.
Task 13.e.3 Draw linear and branched chain structures for polychloroethene, state their properties and explain the differences.

 

1.3 (f)Understand the existence of interparticle forces in the liquid state and hence explain the trends in the boiling temperatures of the noble gases and the hydrides of the elements of Groups 4, 5, 6 and 7.

Trends in boiling points of noble gases and group 4 hydrides
There is a fairly regular increase in boiling points as the atomic number increases. The boiling temperatures depend on Van der Waals forces between single atoms or between hydride molecules. These forces depend on the number of electrons. The number of electrons increases with atomic number and therefore the strength of the Van der Waals forces increases which means more energy is required to break the bonds.

Trends in boiling points of  group 5,6 and 7 hydrides

The boiling temperatures of the hydrides of these groups also increase as you go down the group. There is one exception. The element at the top of the group has a higher boiling temperature and doesn’t seem to fit the pattern.  The increased boiling tempertures of the first hydride in each group is because the first element in each group is highly electronegative and therefore they form hydrogen bonds that are difficult to break. For this reason the boiling temperatures are higher.
 

(g)To interpret changes of state in terms of the types, motion and arrangement of particles (atoms, molecules and ions) present and explain associated energy changes.

Solid:  Fixed shape.  Volume is hardly affected by temperature and pressure.  Solids contains ordered arrangements of:
single atoms in a giant structure e.g. a metal,
ions in a giant structure e.g. sodium chloride
atoms joined together in a giant structure e.g. diamond
molecules in a simple molecular structure
All particles are in fixed positions but do vibrate.  The amount of vibrational energy increases as the temperature increases.  Energy is absorbed to move particles apart.  Separation distances in solids give particles the minimum energy possible (most stable)

Liquid:  Shape of container but otherwise spherical.  Finite volume.  Less compressible than a gas.
In a solid particles may only vibrate about a fixed position but in a liquid, they may also rotate and translation is also possible. In a liquid, particles also move from place to place although not as freely as in a gas.  There is greater disorder in the liquid but some order is retained and particles have higher energies.

Gas: Takes shape of container.  Volume greatly affected by pressure and temperature.  The energy of gas particles is much greater than for liquid particles and the separation is also much greater.  The kinetic theory describes the behaviour of particles in a gas.  Much energy is needed to vaporise a liquid.

Melting - endothermic (energy taken in)
simple molecular structures: Weak Van der Waals forces between atoms or molecules so little energy needed to melt hence low melting temperatures.
hydrogen bonded molecular structures: Hydrogen bonds much stronger so more energy and higher melting temperatures needed.
Giant ionic structures: Strong electrostatic attractions between each ion and many other ions of opposite charge require much energy to melt hence high melting temperatures.
Giant atomic structures: Each atom held firmly by strong covalent bonds with no simple molecules.  Much energy needed to melt these structures and hence high melting temperatures.
Boiling - endothermic
With much of the bonding disrupted the difference between melting temperatures and boling temperatures is relatively small.
freezing - exothermic (energy taken in)
condensation - exothermic

(h) Recall the shapes of the following molecules and ions; BeCl2 CO2 HCl SO2 H2O BCl3 NH4+ CH4 NH3 SO32- CO32- NO3- PCl5 SF6

molecule shape wrt negative centres shape wrt atoms bonds and lone pairs around central atom
BeCl2 linear linear 2 single bonds
CO2 linear linear 2 double bonds
HCl tetrahedral linear 1 single bond, 3 lone pairs
SO2 trigonal planar bent 2 double bonds, 1 lone pair
H2O tetrahedral bent 2 single bonds, 2 lone pairs
BCl3 trigonal planar trigonal planar 3 single bonds
NH4+ tetrahedral tetrahedral 3 single bonds, 1 coordinate bond
CH4 tetrahedral tetrahedral 4 single bonds
NH3 tetrahedral pyramidal 3 single bonds, 1 lone pair
SO32- tetrahedral pyramidal 1 double, 2 coordinate, 1 lone pair
CO32- trigonal planar trigonal planar  2 single bonds, 1 double bond
NO3-  trigonal planar trigonal planar 2 double bonds, 1 single bond
PCl5 trigonal bipyramidal trigonal bipyramidal 5 single bonds
SF6 octahedral octahedral 6 single bonds

Task 1.3h.1 Draw diagrams to show the bonding in all of the above species.
Task 1.3h.2 Draw diagrams to show the shapes of the above species.

Story 1.3h Trainer SF6 Climate Change Danger

1.3 (i) Interpret the shapes in (h) in terms of the valence shell electron pair repulsion theory, and predict shapes of related molecules and ions (eg from a knowledge of NH3 the shape of PH3 can be predicted

2 pairs linear  angle = 180o

3 pairs trigonal planar  BCl

4 pairs tetrahedral    angle = 109.5o  CH4 NH3 NH4+ (or bent

5 pairs trigonal bipyramidal

6 pairs octahedral (or square planar)

In a molecule, pairs of electrons create negative centres that surround the central atom. These negative centres repel each other and arrange themselves to be as far apart as possible, thus minimising repulsion. Lone pairs repel more strongly than bonding pairs of electrons therefore a lone pair distorts the shape of a molecule.  
Phosporous  has 5 outer electrons just like nitrogen so PH3 will have four electron pairs and be tetrahedral with respect to electron pairs like NH3.  Also like ammonia, PH3 has a lone pair which generates more repulsion than bonding pairs of electrons.  The shape of PH3 is therefore distorted tetrahedral.
Task 1.3i Predict and draw the shape for the following molecules or ions: BeF2, SeO2, SCl6, H2S, AlCl3, SiCl4, PF5, PO3-, SiO32-, Cl2O.

1.3 (j)Describe metallic bonding and explain (a) the electrical conductivity of metals and graphite in terms of mobility of electrons (b) the melting points and melting points of metals

Metallic bonds hold the atoms together in a solid metal or alloy. In metals, the atoms are said have positive ions occupying the lattice positions and thus leaving delocalised electrons to move freely through the lattice. The free electrons, able to move in any direction explain the electrical conductivity of the metals as they can transfer the charge.
Metals generally have high melting points.  This is because each atom is held strongly in place by strong metallic bonds.  The boiling points are often very much higher because the forces between atoms still exist even when the metal has melted.  Much energy is needed to move the metal atoms far apart to form a gas.

Graphite has layers of strongly bonded carbon atoms. The layers are stacked and joined together by weak bonds between the layers. Between the stacked layers there are delocalised electrons which can transfer electricity. This allows electricity to be conducted along the length of carbon planes but electricity can not be conducted across the layers because the electrons are localised inside each layers.